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1.

2058
Accesses

Research   Open Access Highly Accessed

A survey of enabling technologies in synthetic biology

Linda J Kahl, Drew Endy Journal of Biological Engineering 2013, 7:13 (10 May 2013)

Abstract | Full text | PDF | PubMed

2.

807
Accesses

Research   Open Access Highly Accessed

Engineering bacteria to solve the Burnt Pancake Problem

Karmella A Haynes, Marian L Broderick, Adam D Brown, Trevor L Butner, James O Dickson, W Lance Harden, Lane H Heard, Eric L Jessen, Kelly J Malloy, Brad J Ogden, Sabriya Rosemond, Samantha Simpson, Erin Zwack, A Malcolm Campbell, Todd T Eckdahl, Laurie J Heyer, Jeffrey L Poet Journal of Biological Engineering 2008, 2:8 (20 May 2008)

Abstract | Full text | PDF | PubMed | 1 comment |  Editor’s summary

E. coli cells can be engineered to sort DNA fragments into a specific order and orientation, similar to the mathematical burnt pancake problem, providing a flexible new tool for manipulating transgenic DNA in vivo.

3.

763
Accesses

Research   Open Access

A standard vector for the chromosomal integration and characterization of BioBrick™ parts in Escherichia coli

Susanna Zucca, Lorenzo Pasotti, Nicolò Politi, Maria Cusella De Angelis, Paolo Magni Journal of Biological Engineering 2013, 7:12 (10 May 2013)

Abstract | Full text | PDF | ePUB | PubMed

4.

617
Accesses

Research   Open Access

Model-driven elucidation of the inherent capacity of Geobacter sulfurreducens for electricity generation

Longfei Mao, Wynand S Verwoerd Journal of Biological Engineering 2013, 7:14 (29 May 2013)

Abstract | Full text | PDF | ePUB | PubMed

5.

524
Accesses

Methodology   Open Access Highly Accessed

Measuring the activity of BioBrick promoters using an in vivo reference standard

Jason R Kelly, Adam J Rubin, Joseph H Davis, Caroline M Ajo-Franklin, John Cumbers, Michael J Czar, Kim de Mora, Aaron L Glieberman, Dileep D Monie, Drew Endy Journal of Biological Engineering 2009, 3:4 (20 March 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

6.

475
Accesses

Methodology   Open Access Highly Accessed

Engineering BioBrick vectors from BioBrick parts

Reshma P Shetty, Drew Endy, Thomas F Knight Journal of Biological Engineering 2008, 2:5 (14 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

7.

427
Accesses

Research   Open Access Highly Accessed

Solving a Hamiltonian Path Problem with a bacterial computer

Jordan Baumgardner, Karen Acker, Oyinade Adefuye, Samuel Crowley, Will DeLoache, James O Dickson, Lane Heard, Andrew T Martens, Nickolaus Morton, Michelle Ritter, Amber Shoecraft, Jessica Treece, Matthew Unzicker, Amanda Valencia, Mike Waters, A Malcolm Campbell, Laurie J Heyer, Jeffrey L Poet, Todd T Eckdahl Journal of Biological Engineering 2009, 3:11 (24 July 2009)

Abstract | Full text | PDF | PubMed | F1000 Biology |  Editor’s summary

E. coli cells can be engineered to evaluate possible combinations of expressed genes and determine which is correct given a predetermined outcome, similar to the mathematical Hamiltonian path problem, providing proof of concept for bacterial computers solving other NP-complete problems.

8.

411
Accesses

Research   Open Access

Wide-dynamic-range promoters engineered for cyanobacteria

Hsin-Ho Huang, Peter Lindblad Journal of Biological Engineering 2013, 7:10 (22 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

9.

388
Accesses

Reviewer acknowledgement   Open Access

Acknowledgement of manuscript reviewers

Mark Eiteman Journal of Biological Engineering 2013, 7:4 (30 May 2013)

Abstract | Full text | PDF | ePUB | PubMed

10.

373
Accesses

Research   Open Access Highly Accessed

Engineered cell-cell communication via DNA messaging

Monica E Ortiz, Drew Endy Journal of Biological Engineering 2012, 6:16 (7 September 2012)

Abstract | Full text | PDF | PubMed

11.

364
Accesses

Research   Open Access

Early differentiation patterning of mouse embryonic stem cells in response to variations in alginate substrate stiffness

Joseph Candiello, Satish S Singh, Keith Task, Prashant N Kumta, Ipsita Banerjee Journal of Biological Engineering 2013, 7:9 (9 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

12.

304
Accesses

Research   Open Access Highly Accessed

Enhanced production of bacterial cellulose by using a biofilm reactor and its material property analysis

Kuan-Chen Cheng, Jeff M Catchmark, Ali Demirci Journal of Biological Engineering 2009, 3:12 (24 July 2009)

Abstract | Full text | PDF | PubMed

13.

304
Accesses

Review   Open Access

Environment-sensitive behavior of fluorescent molecular rotors

Mark A Haidekker, Emmanuel A Theodorakis Journal of Biological Engineering 2010, 4:11 (15 September 2010)

Abstract | Full text | PDF | PubMed

14.

305
Accesses

Research   Open Access

Pushing the science forward: chitosan nanoparticles and functional repair of CNS tissue after spinal cord injury

Bojun Chen, Debra Bohnert, Richard Borgens, Youngnam Cho Journal of Biological Engineering 2013, 7:15 (3 June 2013)

Abstract | Full text | PDF | PubMed

15.

295
Accesses

Research   Open Access

Effect of substrate stiffness on early human embryonic stem cell differentiation

Nikolai Eroshenko, Rukmani Ramachandran, Vamsi K Yadavalli, Raj R Rao Journal of Biological Engineering 2013, 7:7 (21 March 2013)

Abstract | Full text | PDF | PubMed

16.

287
Accesses

Research   Open Access Highly Accessed

TinkerCell: modular CAD tool for synthetic biology

Deepak Chandran, Frank T Bergmann, Herbert M Sauro Journal of Biological Engineering 2009, 3:19 (29 October 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

17.

284
Accesses

Research   Open Access Highly Accessed

Antimicrobial activities of commercial nanoparticles against an environmental soil microbe, Pseudomonas putida KT2440

Priyanka Gajjar, Brian Pettee, David W Britt, Wenjie Huang, William P Johnson, Anne J Anderson Journal of Biological Engineering 2009, 3:9 (26 June 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

18.

282
Accesses

Research   Open Access Highly Accessed

A synthetic biology approach to self-regulatory recombinant protein production in Escherichia coli

Martin Dragosits, Daniel Nicklas, Ilias Tagkopoulos Journal of Biological Engineering 2012, 6:2 (30 March 2012)

Abstract | Full text | PDF | PubMed

19.

281
Accesses

Methodology   Open Access Highly Accessed

BglBrick vectors and datasheets: A synthetic biology platform for gene expression

Taek Lee, Rachel A Krupa, Fuzhong Zhang, Meghdad Hajimorad, William J Holtz, Nilu Prasad, Sung Lee, Jay D Keasling Journal of Biological Engineering 2011, 5:12 (20 September 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

20.

262
Accesses

Review   Open Access Highly Accessed

Bioresponsive matrices in drug delivery

Jin-Oh You, Dariela Almeda, George JC Ye, Debra T Auguste Journal of Biological Engineering 2010, 4:15 (29 November 2010)

Abstract | Full text | PDF | PubMed

21.

257
Accesses

Research   Open Access

Efficient extraction method to collect sugar from sweet sorghum

Fei Jia, Jeerwan Chawhuaymak, Mark R Riley, Werner Zimmt, Kimberly L Ogden Journal of Biological Engineering 2013, 7:1 (10 January 2013)

Abstract | Full text | PDF | PubMed

22.

250
Accesses

Research   Open Access

A synthetic system links FeFe-hydrogenases to essential E. coli sulfur metabolism

Buz Barstow, Christina M Agapakis, Patrick M Boyle, Gerald Grandl, Pamela A Silver, Edwin H Wintermute Journal of Biological Engineering 2011, 5:7 (26 May 2011)

Abstract | Full text | PDF | PubMed

23.

245
Accesses

Research   Open Access

Fractionation of the rice bran layer and quantification of vitamin E, oryzanol, protein, and rice bran saccharide

Rebecca Schramm, Alicia Abadie, Na Hua, Zhimin Xu, Marybeth Lima Journal of Biological Engineering 2007, 1:9 (28 December 2007)

Abstract | Full text | PDF | PubMed

24.

236
Accesses

Research   Open Access

Shear- vs. nanotopography-guided control of growth of endothelial cells on RGD-nanoparticle-nanowell arrays

Katherine E McCracken, Phat L Tran, David J You, Marvin J Slepian, Jeong-Yeol Yoon Journal of Biological Engineering 2013, 7:11 (22 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

25.

235
Accesses

Research   Open Access Highly Accessed

Insulation of a synthetic hydrogen metabolism circuit in bacteria

Christina M Agapakis, Daniel C Ducat, Patrick M Boyle, Edwin H Wintermute, Jeffrey C Way, Pamela A Silver Journal of Biological Engineering 2010, 4:3 (25 February 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

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