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1.
2058 Accesses
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A survey of enabling technologies in synthetic biology
Linda J Kahl, Drew Endy Journal of Biological Engineering 2013, 7:13 (10 May 2013)
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2.
807 Accesses
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Engineering bacteria to solve the Burnt Pancake Problem
Karmella A Haynes, Marian L Broderick, Adam D Brown, Trevor L Butner, James O Dickson, W Lance Harden, Lane H Heard, Eric L Jessen, Kelly J Malloy, Brad J Ogden, Sabriya Rosemond, Samantha Simpson, Erin Zwack, A Malcolm Campbell, Todd T Eckdahl, Laurie J Heyer, Jeffrey L Poet Journal of Biological Engineering 2008, 2:8 (20 May 2008)
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Editor’s summary
E. coli cells can be engineered to sort DNA fragments into a specific order and orientation, similar to the mathematical burnt pancake problem, providing a flexible new tool for manipulating transgenic DNA in vivo.
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3.
763 Accesses
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A standard vector for the chromosomal integration and characterization of BioBrick™ parts in Escherichia coli
Susanna Zucca, Lorenzo Pasotti, Nicolò Politi, Maria Cusella De Angelis, Paolo Magni Journal of Biological Engineering 2013, 7:12 (10 May 2013)
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4.
617 Accesses
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Model-driven elucidation of the inherent capacity of Geobacter sulfurreducens for electricity generation
Longfei Mao, Wynand S Verwoerd Journal of Biological Engineering 2013, 7:14 (29 May 2013)
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5.
524 Accesses
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Measuring the activity of BioBrick promoters using an in vivo reference standard
Jason R Kelly, Adam J Rubin, Joseph H Davis, Caroline M Ajo-Franklin, John Cumbers, Michael J Czar, Kim de Mora, Aaron L Glieberman, Dileep D Monie, Drew Endy Journal of Biological Engineering 2009, 3:4 (20 March 2009)
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6.
475 Accesses
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Engineering BioBrick vectors from BioBrick parts
Reshma P Shetty, Drew Endy, Thomas F Knight Journal of Biological Engineering 2008, 2:5 (14 April 2008)
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7.
427 Accesses
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Solving a Hamiltonian Path Problem with a bacterial computer
Jordan Baumgardner, Karen Acker, Oyinade Adefuye, Samuel Crowley, Will DeLoache, James O Dickson, Lane Heard, Andrew T Martens, Nickolaus Morton, Michelle Ritter, Amber Shoecraft, Jessica Treece, Matthew Unzicker, Amanda Valencia, Mike Waters, A Malcolm Campbell, Laurie J Heyer, Jeffrey L Poet, Todd T Eckdahl Journal of Biological Engineering 2009, 3:11 (24 July 2009)
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| F1000 Biology
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Editor’s summary
E. coli cells can be engineered to evaluate possible combinations of expressed genes and determine which is correct given a predetermined outcome, similar to the mathematical Hamiltonian path problem, providing proof of concept for bacterial computers solving other NP-complete problems.
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8.
411 Accesses
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Wide-dynamic-range promoters engineered for cyanobacteria
Hsin-Ho Huang, Peter Lindblad Journal of Biological Engineering 2013, 7:10 (22 April 2013)
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9.
388 Accesses
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Acknowledgement of manuscript reviewers
Mark Eiteman Journal of Biological Engineering 2013, 7:4 (30 May 2013)
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10.
373 Accesses
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Engineered cell-cell communication via DNA messaging
Monica E Ortiz, Drew Endy Journal of Biological Engineering 2012, 6:16 (7 September 2012)
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11.
364 Accesses
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Early differentiation patterning of mouse embryonic stem cells in response to variations in alginate substrate stiffness
Joseph Candiello, Satish S Singh, Keith Task, Prashant N Kumta, Ipsita Banerjee Journal of Biological Engineering 2013, 7:9 (9 April 2013)
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12.
304 Accesses
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Enhanced production of bacterial cellulose by using a biofilm reactor and its material property analysis
Kuan-Chen Cheng, Jeff M Catchmark, Ali Demirci Journal of Biological Engineering 2009, 3:12 (24 July 2009)
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13.
304 Accesses
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Environment-sensitive behavior of fluorescent molecular rotors
Mark A Haidekker, Emmanuel A Theodorakis Journal of Biological Engineering 2010, 4:11 (15 September 2010)
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14.
305 Accesses
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Pushing the science forward: chitosan nanoparticles and functional repair of CNS tissue after spinal cord injury
Bojun Chen, Debra Bohnert, Richard Borgens, Youngnam Cho Journal of Biological Engineering 2013, 7:15 (3 June 2013)
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15.
295 Accesses
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Effect of substrate stiffness on early human embryonic stem cell differentiation
Nikolai Eroshenko, Rukmani Ramachandran, Vamsi K Yadavalli, Raj R Rao Journal of Biological Engineering 2013, 7:7 (21 March 2013)
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16.
287 Accesses
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TinkerCell: modular CAD tool for synthetic biology
Deepak Chandran, Frank T Bergmann, Herbert M Sauro Journal of Biological Engineering 2009, 3:19 (29 October 2009)
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17.
284 Accesses
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Antimicrobial activities of commercial nanoparticles against an environmental soil microbe, Pseudomonas putida KT2440
Priyanka Gajjar, Brian Pettee, David W Britt, Wenjie Huang, William P Johnson, Anne J Anderson Journal of Biological Engineering 2009, 3:9 (26 June 2009)
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18.
282 Accesses
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A synthetic biology approach to self-regulatory recombinant protein production in Escherichia coli
Martin Dragosits, Daniel Nicklas, Ilias Tagkopoulos Journal of Biological Engineering 2012, 6:2 (30 March 2012)
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19.
281 Accesses
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BglBrick vectors and datasheets: A synthetic biology platform for gene expression
Taek Lee, Rachel A Krupa, Fuzhong Zhang, Meghdad Hajimorad, William J Holtz, Nilu Prasad, Sung Lee, Jay D Keasling Journal of Biological Engineering 2011, 5:12 (20 September 2011)
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20.
262 Accesses
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Bioresponsive matrices in drug delivery
Jin-Oh You, Dariela Almeda, George JC Ye, Debra T Auguste Journal of Biological Engineering 2010, 4:15 (29 November 2010)
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21.
257 Accesses
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Efficient extraction method to collect sugar from sweet sorghum
Fei Jia, Jeerwan Chawhuaymak, Mark R Riley, Werner Zimmt, Kimberly L Ogden Journal of Biological Engineering 2013, 7:1 (10 January 2013)
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22.
250 Accesses
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A synthetic system links FeFe-hydrogenases to essential E. coli sulfur metabolism
Buz Barstow, Christina M Agapakis, Patrick M Boyle, Gerald Grandl, Pamela A Silver, Edwin H Wintermute Journal of Biological Engineering 2011, 5:7 (26 May 2011)
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23.
245 Accesses
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Fractionation of the rice bran layer and quantification of vitamin E, oryzanol, protein, and rice bran saccharide
Rebecca Schramm, Alicia Abadie, Na Hua, Zhimin Xu, Marybeth Lima Journal of Biological Engineering 2007, 1:9 (28 December 2007)
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24.
236 Accesses
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Shear- vs. nanotopography-guided control of growth of endothelial cells on RGD-nanoparticle-nanowell arrays
Katherine E McCracken, Phat L Tran, David J You, Marvin J Slepian, Jeong-Yeol Yoon Journal of Biological Engineering 2013, 7:11 (22 April 2013)
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25.
235 Accesses
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Insulation of a synthetic hydrogen metabolism circuit in bacteria
Christina M Agapakis, Daniel C Ducat, Patrick M Boyle, Edwin H Wintermute, Jeffrey C Way, Pamela A Silver Journal of Biological Engineering 2010, 4:3 (25 February 2010)
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